WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:DY3.2 Sequence Name  DY3.2
Length (nt)  1701   Chromosome Location  I: 8763056-8763153
Chromosome . Primary Identifier  I Chromosome Location . Start  8763056
Chromosome Location . End  8763153
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
DY3.2

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE15746 LMN-1 64.1 566 Caenorhabditis elegans
 

Other

42 RNAi

WormBase ID
WBRNAi00070490
WBRNAi00101829
WBRNAi00059925
WBRNAi00077202
WBRNAi00106198
WBRNAi00080942
WBRNAi00063143
WBRNAi00024969
WBRNAi00108136
WBRNAi00074076
WBRNAi00085386
WBRNAi00072401
WBRNAi00074075
WBRNAi00074074
WBRNAi00074077
WBRNAi00074079
WBRNAi00074078
WBRNAi00074080
WBRNAi00080941
WBRNAi00116674
WBRNAi00087593
WBRNAi00087592
WBRNAi00080579
WBRNAi00074081
WBRNAi00024970
WBRNAi00115677
WBRNAi00115676
WBRNAi00080936
WBRNAi00080938
WBRNAi00080940

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:DY3.2 8763056 8763153 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003052 lmn-1 DY3.2 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:DY3.2 8763056 8763153 1
CDS:DY3.2 8763243 8763327 1
CDS:DY3.2 8763376 8763489 1
CDS:DY3.2 8763645 8763878 1
CDS:DY3.2 8763931 8764971 1
CDS:DY3.2 8765056 8765184 1

1 Sequence

Length
1701

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:DY3.2.1 DY3.2.1 2163   I: 8763041-8765631