WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F53H4.6.1 Sequence Name  F53H4.6.1
Length (nt)  3798   Chromosome Location  X: 15851951-15860606
Chromosome . Primary Identifier  X Chromosome Location . Start  15851951
Chromosome Location . End  15860606 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53H4.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010011 F53H4.6 F53H4.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53H4.6 F53H4.6 2769   X: 15852975-15853277

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F53H4.6.1 15851951 15860606 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon263306   1327   X: 15851951-15853277 Caenorhabditis elegans
Exon263307   163   X: 15853328-15853490 Caenorhabditis elegans
Exon263308   173   X: 15853544-15853716 Caenorhabditis elegans
Exon263309   151   X: 15853761-15853911 Caenorhabditis elegans
Exon263310   291   X: 15855060-15855350 Caenorhabditis elegans
Exon263311   323   X: 15855403-15855725 Caenorhabditis elegans
Exon263312   646   X: 15855774-15856419 Caenorhabditis elegans
Exon263316   156   X: 15858287-15858442 Caenorhabditis elegans
Exon263317   150   X: 15858676-15858825 Caenorhabditis elegans
Exon263318   105   X: 15859378-15859482 Caenorhabditis elegans
Exon263319   150   X: 15859646-15859795 Caenorhabditis elegans
Exon263320   163   X: 15860444-15860606 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F53H4.6.1 15851951 15860606 -1

1 Sequence

Length
3798

1 Sequence Ontology Term

Identifier Name Description
transcript