WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F53H4.1.1 Sequence Name  F53H4.1.1
Length (nt)  3281   Chromosome Location  X: 15861294-15865918
Chromosome . Primary Identifier  X Chromosome Location . Start  15861294
Chromosome Location . End  15865918 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53H4.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000803 csb-1 F53H4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53H4.1 F53H4.1 2874   X: 15861695-15862036

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F53H4.1.1 15861294 15865918 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon263321   743   X: 15861294-15862036 Caenorhabditis elegans
Exon263322   163   X: 15862088-15862250 Caenorhabditis elegans
Exon263323   179   X: 15862299-15862477 Caenorhabditis elegans
Exon263324   217   X: 15862529-15862745 Caenorhabditis elegans
Exon263325   288   X: 15862940-15863227 Caenorhabditis elegans
Exon263326   323   X: 15863274-15863596 Caenorhabditis elegans
Exon263327   628   X: 15863645-15864272 Caenorhabditis elegans
Exon263328   147   X: 15864518-15864664 Caenorhabditis elegans
Exon263329   462   X: 15865279-15865740 Caenorhabditis elegans
Exon263330   131   X: 15865788-15865918 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F53H4.1.1 15861294 15865918 -1

1 Sequence

Length
3281

1 Sequence Ontology Term

Identifier Name Description
transcript