WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

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mRNA :

WormMine ID  Transcript:F53H4.5.1 Sequence Name  F53H4.5.1
Length (nt)  2048   Chromosome Location  X: 15879085-15885626
Chromosome . Primary Identifier  X Chromosome Location . Start  15879085
Chromosome Location . End  15885626 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53H4.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010010 gmeb-2 F53H4.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53H4.5 F53H4.5 1554   X: 15879096-15879344

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F53H4.5.1 15879085 15885626 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon263338   260   X: 15879085-15879344 Caenorhabditis elegans
Exon263339   299   X: 15882073-15882371 Caenorhabditis elegans
Exon263340   143   X: 15882427-15882569 Caenorhabditis elegans
Exon263341   414   X: 15883543-15883956 Caenorhabditis elegans
Exon263342   251   X: 15884010-15884260 Caenorhabditis elegans
Exon263343   681   X: 15884946-15885626 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F53H4.5.1 15879085 15885626 1

1 Sequence

Length
2048

1 Sequence Ontology Term

Identifier Name Description
transcript