WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F53H4.3.1 Sequence Name  F53H4.3.1
Length (nt)  901   Chromosome Location  X: 15885604-15887595
Chromosome . Primary Identifier  X Chromosome Location . Start  15885604
Chromosome Location . End  15887595 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53H4.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010008 F53H4.3 F53H4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53H4.3 F53H4.3 780   X: 15885716-15885829

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F53H4.3.1 15885604 15887595 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon263344   226   X: 15885604-15885829 Caenorhabditis elegans
Exon263345   79   X: 15885977-15886055 Caenorhabditis elegans
Exon263346   71   X: 15886113-15886183 Caenorhabditis elegans
Exon263347   87   X: 15886235-15886321 Caenorhabditis elegans
Exon263348   76   X: 15886378-15886453 Caenorhabditis elegans
Exon263349   136   X: 15886599-15886734 Caenorhabditis elegans
Exon263350   226   X: 15887370-15887595 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F53H4.3.1 15885604 15887595 -1

1 Sequence

Length
901

1 Sequence Ontology Term

Identifier Name Description
transcript