WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:E03G2.4.2 Sequence Name  E03G2.4.2
Length (nt)  1367   Chromosome Location  X: 15952374-15954789
Chromosome . Primary Identifier  X Chromosome Location . Start  15952374
Chromosome Location . End  15954789 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
E03G2.4.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000759 col-186 E03G2.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:E03G2.4 E03G2.4 1002   X: 15952398-15952487

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:E03G2.4.2 15952374 15954789 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon263417   114   X: 15952374-15952487 Caenorhabditis elegans
Exon263420   57   X: 15952533-15952589 Caenorhabditis elegans
Exon263422   402   X: 15952707-15953108 Caenorhabditis elegans
Exon263424   271   X: 15953209-15953479 Caenorhabditis elegans
Exon263426   135   X: 15953997-15954131 Caenorhabditis elegans
Exon263428   388   X: 15954402-15954789 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:E03G2.4.2 15952374 15954789 1

1 Sequence

Length
1367

1 Sequence Ontology Term

Identifier Name Description
transcript