WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F36A2.4.1 Sequence Name  F36A2.4.1
Length (nt)  1883   Chromosome Location  I: 8808965-8811647
Chromosome . Primary Identifier  I Chromosome Location . Start  8808965
Chromosome Location . End  8811647 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F36A2.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006682 twk-30 F36A2.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F36A2.4 F36A2.4 1827   I: 8809006-8809112

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F36A2.4.1 8808965 8811647 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon23389   148   I: 8808965-8809112 Caenorhabditis elegans
Exon23390   89   I: 8809156-8809244 Caenorhabditis elegans
Exon23391   44   I: 8809288-8809331 Caenorhabditis elegans
Exon23392   334   I: 8809382-8809715 Caenorhabditis elegans
Exon23393   154   I: 8809761-8809914 Caenorhabditis elegans
Exon23394   134   I: 8809966-8810099 Caenorhabditis elegans
Exon23395   127   I: 8810146-8810272 Caenorhabditis elegans
Exon23396   60   I: 8810319-8810378 Caenorhabditis elegans
Exon23397   333   I: 8810431-8810763 Caenorhabditis elegans
Exon23398   130   I: 8810808-8810937 Caenorhabditis elegans
Exon23399   111   I: 8810982-8811092 Caenorhabditis elegans
Exon23400   99   I: 8811140-8811238 Caenorhabditis elegans
Exon23401   120   I: 8811528-8811647 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F36A2.4.1 8808965 8811647 -1

1 Sequence

Length
1883

1 Sequence Ontology Term

Identifier Name Description
transcript