WormMine: Gene WBGene00284856

• WormBase Gene ID: WBGene00284856
• Gene Name: C09G1.7
• Sequence Name: C09G1.7
• Organism: Caenorhabditis elegans
• Automated Description: Enriched in germ line and ut4 based on single-cell RNA-seq studies. Is affected by ogt-1 based on RNA-seq studies.
• Biotype: SO:0001263
• Genetic Position: X:±
• Length (nt): 131

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00284856

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:C09G1.7	C09G1.7	131	X: 15964100-15964230

Other

0 CDSs

0 RNAi Result

9 Allele

• gk964260
• gk962707
• gk963810
• gk963581
• gk963633
• gk964121
• gk961400
• WBVar01528889
• WBVar01704426

1 Chromosome

• WormBase ID: X
• Organism: Caenorhabditis elegans
• Length (nt): 17718942

1 Chromosome Location

• Feature . Primary Identifier: WBGene00284856
• Start: 15964100
• End: 15964230
• Strand: 1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

1 Downstream Intergenic Region

• WormBase ID: intergenic_region_chrX_15964231..15966118
• Length (nt): 1888
• Chromosome Location: X: 15964231-15966118
• Organism: Caenorhabditis elegans

3 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Transcripts that showed significantly decreased expression in ogt-1(ok1474) neuronal cells isolated by FACs comparing to in FACs isolated neuronal cells from wild type.	DESeq2, fold change > 2, FDR < 0.05.	WBPaper00066485:ogt-1(ok1474)_downregulated_neuron
	Single-cell RNA-Seq cell group 57_1 expressed in germline.	scVI 0.6.0	WBPaper00065841:57_1
	Single-cell RNA-Seq cell group 13_1 expressed in epithelium.	scVI 0.6.0	WBPaper00065841:13_1

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00284856
• Start: 15964100
• End: 15964230
• Strand: 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 131

1 Sequence Ontology Term