WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C09G1.4.2 Sequence Name  C09G1.4.2
Length (nt)  2111   Chromosome Location  X: 15987966-16006629
Chromosome . Primary Identifier  X Chromosome Location . Start  15987966
Chromosome Location . End  16006629 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09G1.4.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007486 C09G1.4 C09G1.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09G1.4 C09G1.4 1638   X: 15988327-15988517

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C09G1.4.2 15987966 16006629 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon263476   552   X: 15987966-15988517 Caenorhabditis elegans
Exon263479   128   X: 15989880-15990007 Caenorhabditis elegans
Exon263481   162   X: 15990285-15990446 Caenorhabditis elegans
Exon263483   137   X: 15990522-15990658 Caenorhabditis elegans
Exon263485   244   X: 15991359-15991602 Caenorhabditis elegans
Exon263487   121   X: 15991651-15991771 Caenorhabditis elegans
Exon263489   153   X: 15992204-15992356 Caenorhabditis elegans
Exon263491   270   X: 15992844-15993113 Caenorhabditis elegans
Exon263493   150   X: 15993582-15993731 Caenorhabditis elegans
Exon263495   96   X: 15996840-15996935 Caenorhabditis elegans
Exon263499   98   X: 16006532-16006629 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C09G1.4.2 15987966 16006629 -1

1 Sequence

Length
2111

1 Sequence Ontology Term

Identifier Name Description
transcript