WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C09G1.4.1 Sequence Name  C09G1.4.1
Length (nt)  2010   Chromosome Location  X: 15987971-15996937
Chromosome . Primary Identifier  X Chromosome Location . Start  15987971
Chromosome Location . End  15996937 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09G1.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007486 C09G1.4 C09G1.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09G1.4 C09G1.4 1638   X: 15988327-15988517

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C09G1.4.1 15987971 15996937 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon263477   547   X: 15987971-15988517 Caenorhabditis elegans
Exon263478   128   X: 15989880-15990007 Caenorhabditis elegans
Exon263480   162   X: 15990285-15990446 Caenorhabditis elegans
Exon263482   137   X: 15990522-15990658 Caenorhabditis elegans
Exon263484   244   X: 15991359-15991602 Caenorhabditis elegans
Exon263486   121   X: 15991651-15991771 Caenorhabditis elegans
Exon263488   153   X: 15992204-15992356 Caenorhabditis elegans
Exon263490   270   X: 15992844-15993113 Caenorhabditis elegans
Exon263492   150   X: 15993582-15993731 Caenorhabditis elegans
Exon263496   98   X: 15996840-15996937 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C09G1.4.1 15987971 15996937 -1

1 Sequence

Length
2010

1 Sequence Ontology Term

Identifier Name Description
transcript