WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0395.1.1 Sequence Name  B0395.1.1
Length (nt)  1926   Chromosome Location  X: 16017121-16021755
Chromosome . Primary Identifier  X Chromosome Location . Start  16017121
Chromosome Location . End  16021755 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0395.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003729 nhx-1 B0395.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0395.1 B0395.1 1545   X: 16017518-16017608

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0395.1.1 16017121 16021755 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon263518   295   X: 16017121-16017415 Caenorhabditis elegans
Exon263520   102   X: 16017507-16017608 Caenorhabditis elegans
Exon263521   123   X: 16018675-16018797 Caenorhabditis elegans
Exon263523   138   X: 16018844-16018981 Caenorhabditis elegans
Exon263525   111   X: 16019031-16019141 Caenorhabditis elegans
Exon263527   80   X: 16019185-16019264 Caenorhabditis elegans
Exon263530   155   X: 16019675-16019829 Caenorhabditis elegans
Exon263532   102   X: 16019879-16019980 Caenorhabditis elegans
Exon263534   102   X: 16020037-16020138 Caenorhabditis elegans
Exon263536   116   X: 16020487-16020602 Caenorhabditis elegans
Exon263538   126   X: 16020652-16020777 Caenorhabditis elegans
Exon263540   167   X: 16020824-16020990 Caenorhabditis elegans
Exon263542   60   X: 16021038-16021097 Caenorhabditis elegans
Exon263544   249   X: 16021507-16021755 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0395.1.1 16017121 16021755 1

1 Sequence

Length
1926

1 Sequence Ontology Term

Identifier Name Description
transcript