WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0395.1.2 Sequence Name  B0395.1.2
Length (nt)  1633   Chromosome Location  X: 16017505-16021755
Chromosome . Primary Identifier  X Chromosome Location . Start  16017505
Chromosome Location . End  16021755 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0395.1.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003729 nhx-1 B0395.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0395.1 B0395.1 1545   X: 16017518-16017608

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0395.1.2 16017505 16021755 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon263519   104   X: 16017505-16017608 Caenorhabditis elegans
Exon263522   123   X: 16018675-16018797 Caenorhabditis elegans
Exon263524   138   X: 16018844-16018981 Caenorhabditis elegans
Exon263526   111   X: 16019031-16019141 Caenorhabditis elegans
Exon263528   80   X: 16019185-16019264 Caenorhabditis elegans
Exon263531   155   X: 16019675-16019829 Caenorhabditis elegans
Exon263533   102   X: 16019879-16019980 Caenorhabditis elegans
Exon263535   102   X: 16020037-16020138 Caenorhabditis elegans
Exon263537   116   X: 16020487-16020602 Caenorhabditis elegans
Exon263539   126   X: 16020652-16020777 Caenorhabditis elegans
Exon263541   167   X: 16020824-16020990 Caenorhabditis elegans
Exon263543   60   X: 16021038-16021097 Caenorhabditis elegans
Exon263545   249   X: 16021507-16021755 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0395.1.2 16017505 16021755 1

1 Sequence

Length
1633

1 Sequence Ontology Term

Identifier Name Description
transcript