WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0395.3.1 Sequence Name  B0395.3.1
Length (nt)  2039   Chromosome Location  X: 16035036-16039231
Chromosome . Primary Identifier  X Chromosome Location . Start  16035036
Chromosome Location . End  16039231 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0395.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007175 B0395.3 B0395.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0395.3 B0395.3 1845   X: 16035224-16035670

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0395.3.1 16035036 16039231 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon263563   635   X: 16035036-16035670 Caenorhabditis elegans
Exon263564   101   X: 16035728-16035828 Caenorhabditis elegans
Exon263567   257   X: 16035880-16036136 Caenorhabditis elegans
Exon263570   101   X: 16036802-16036902 Caenorhabditis elegans
Exon263573   182   X: 16037196-16037377 Caenorhabditis elegans
Exon263576   172   X: 16037486-16037657 Caenorhabditis elegans
Exon263579   166   X: 16037961-16038126 Caenorhabditis elegans
Exon263582   173   X: 16038181-16038353 Caenorhabditis elegans
Exon263585   81   X: 16038884-16038964 Caenorhabditis elegans
Exon263588   104   X: 16039012-16039115 Caenorhabditis elegans
Exon263591   67   X: 16039165-16039231 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0395.3.1 16035036 16039231 -1

1 Sequence

Length
2039

1 Sequence Ontology Term

Identifier Name Description
transcript