WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T27A8.1 Sequence Name  T27A8.1
Length (nt)  1479   Chromosome Location  X: 16049886-16049960
Chromosome . Primary Identifier  X Chromosome Location . Start  16049886
Chromosome Location . End  16049960
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T27A8.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE35629 CPD-2 56.5 492 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00000660
WBRNAi00054266
WBRNAi00019301
WBRNAi00036018
WBRNAi00089169

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T27A8.1 16049886 16049960 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012073 cpd-2 T27A8.1 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:T27A8.1 16049886 16049960 1
CDS:T27A8.1 16051041 16051172 1
CDS:T27A8.1 16051219 16051377 1
CDS:T27A8.1 16051459 16051792 1
CDS:T27A8.1 16051844 16052045 1
CDS:T27A8.1 16053319 16053483 1
CDS:T27A8.1 16053556 16053697 1
CDS:T27A8.1 16054255 16054524 1

1 Sequence

Length
1479

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T27A8.1.1 T27A8.1.1 1614   X: 16049873-16054646