WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C30F2.2.1 Sequence Name  C30F2.2.1
Length (nt)  1175   Chromosome Location  X: 16076785-16085215
Chromosome . Primary Identifier  X Chromosome Location . Start  16076785
Chromosome Location . End  16085215 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C30F2.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007816 C30F2.2 C30F2.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C30F2.2 C30F2.2 612   X: 16076845-16076916

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C30F2.2.1 16076785 16085215 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon263643   132   X: 16076785-16076916 Caenorhabditis elegans
Exon263645   62   X: 16077225-16077286 Caenorhabditis elegans
Exon263647   90   X: 16077336-16077425 Caenorhabditis elegans
Exon263649   70   X: 16077505-16077574 Caenorhabditis elegans
Exon263651   128   X: 16078144-16078271 Caenorhabditis elegans
Exon263653   65   X: 16078321-16078385 Caenorhabditis elegans
Exon263655   73   X: 16078434-16078506 Caenorhabditis elegans
Exon263657   136   X: 16079646-16079781 Caenorhabditis elegans
Exon263662   375   X: 16084363-16084737 Caenorhabditis elegans
Exon263665   44   X: 16085172-16085215 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C30F2.2.1 16076785 16085215 -1

1 Sequence

Length
1175

1 Sequence Ontology Term

Identifier Name Description
transcript