WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R11.1.1 Sequence Name  R11.1.1
Length (nt)  987   Chromosome Location  X: 16189856-16195007
Chromosome . Primary Identifier  X Chromosome Location . Start  16189856
Chromosome Location . End  16195007 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R11.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011226 slc-25A21 R11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R11.1 R11.1 870   X: 16189870-16189921

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R11.1.1 16189856 16195007 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon263722   66   X: 16189856-16189921 Caenorhabditis elegans
Exon263723   134   X: 16190854-16190987 Caenorhabditis elegans
Exon263724   108   X: 16191472-16191579 Caenorhabditis elegans
Exon263725   111   X: 16192815-16192925 Caenorhabditis elegans
Exon263726   165   X: 16193012-16193176 Caenorhabditis elegans
Exon263727   185   X: 16193952-16194136 Caenorhabditis elegans
Exon263728   218   X: 16194790-16195007 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R11.1.1 16189856 16195007 1

1 Sequence

Length
987

1 Sequence Ontology Term

Identifier Name Description
transcript