WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T01B4.1.1 Sequence Name  T01B4.1.1
Length (nt)  1827   Chromosome Location  X: 16299892-16304191
Chromosome . Primary Identifier  X Chromosome Location . Start  16299892
Chromosome Location . End  16304191 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01B4.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006674 twk-21 T01B4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T01B4.1 T01B4.1 1746   X: 16299904-16299975

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T01B4.1.1 16299892 16304191 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon263900   84   X: 16299892-16299975 Caenorhabditis elegans
Exon263905   128   X: 16300795-16300922 Caenorhabditis elegans
Exon263906   123   X: 16300967-16301089 Caenorhabditis elegans
Exon263907   250   X: 16301578-16301827 Caenorhabditis elegans
Exon263908   139   X: 16301881-16302019 Caenorhabditis elegans
Exon263909   248   X: 16302063-16302310 Caenorhabditis elegans
Exon263910   196   X: 16303084-16303279 Caenorhabditis elegans
Exon263911   393   X: 16303353-16303745 Caenorhabditis elegans
Exon263912   266   X: 16303926-16304191 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T01B4.1.1 16299892 16304191 1

1 Sequence

Length
1827

1 Sequence Ontology Term

Identifier Name Description
transcript