WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T01B4.2b.1 Sequence Name  T01B4.2b.1
Length (nt)  2665   Chromosome Location  X: 16306464-16314993
Chromosome . Primary Identifier  X Chromosome Location . Start  16306464
Chromosome Location . End  16314993 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01B4.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006675 twk-22 T01B4.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T01B4.2b T01B4.2b 2178   X: 16306586-16306620

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T01B4.2b.1 16306464 16314993 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon263913   157   X: 16306464-16306620 Caenorhabditis elegans
Exon263916   97   X: 16308908-16309004 Caenorhabditis elegans
Exon263919   122   X: 16309416-16309537 Caenorhabditis elegans
Exon263922   123   X: 16309584-16309706 Caenorhabditis elegans
Exon263925   250   X: 16310270-16310519 Caenorhabditis elegans
Exon263928   151   X: 16310575-16310725 Caenorhabditis elegans
Exon263931   251   X: 16310770-16311020 Caenorhabditis elegans
Exon263934   196   X: 16311783-16311978 Caenorhabditis elegans
Exon263937   315   X: 16312213-16312527 Caenorhabditis elegans
Exon263940   121   X: 16312982-16313102 Caenorhabditis elegans
Exon263943   69   X: 16313180-16313248 Caenorhabditis elegans
Exon263946   239   X: 16313296-16313534 Caenorhabditis elegans
Exon263949   574   X: 16314420-16314993 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T01B4.2b.1 16306464 16314993 1

1 Sequence

Length
2665

1 Sequence Ontology Term

Identifier Name Description
transcript