WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T01B4.2a.1 Sequence Name  T01B4.2a.1
Length (nt)  2696   Chromosome Location  X: 16308364-16314998
Chromosome . Primary Identifier  X Chromosome Location . Start  16308364
Chromosome Location . End  16314998 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01B4.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006675 twk-22 T01B4.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T01B4.2a T01B4.2a 2250   X: 16308440-16308546

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T01B4.2a.1 16308364 16314998 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon263914   183   X: 16308364-16308546 Caenorhabditis elegans
Exon263915   97   X: 16308908-16309004 Caenorhabditis elegans
Exon263918   122   X: 16309416-16309537 Caenorhabditis elegans
Exon263921   123   X: 16309584-16309706 Caenorhabditis elegans
Exon263924   250   X: 16310270-16310519 Caenorhabditis elegans
Exon263927   151   X: 16310575-16310725 Caenorhabditis elegans
Exon263930   251   X: 16310770-16311020 Caenorhabditis elegans
Exon263933   196   X: 16311783-16311978 Caenorhabditis elegans
Exon263936   315   X: 16312213-16312527 Caenorhabditis elegans
Exon263939   121   X: 16312982-16313102 Caenorhabditis elegans
Exon263942   69   X: 16313180-16313248 Caenorhabditis elegans
Exon263945   239   X: 16313296-16313534 Caenorhabditis elegans
Exon263950   579   X: 16314420-16314998 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T01B4.2a.1 16308364 16314998 1

1 Sequence

Length
2696

1 Sequence Ontology Term

Identifier Name Description
transcript