WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C11G6.1d Sequence Name  C11G6.1d
Length (nt)  2829   Chromosome Location  X: 16332450-16332636
Chromosome . Primary Identifier  X Chromosome Location . Start  16332450
Chromosome Location . End  16332636
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C11G6.1d

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE51826 TAF-3, isoform d 107.9 942 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00040358
WBRNAi00040360
WBRNAi00010627
WBRNAi00113506

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:C11G6.1d 16332450 16332636 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006384 taf-3 C11G6.1 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier 		Start End Strand
CDS:C11G6.1d 16332450 16332636 1
CDS:C11G6.1d 16332692 16332807 1
CDS:C11G6.1d 16333497 16334150 1
CDS:C11G6.1d 16334792 16335103 1
CDS:C11G6.1d 16335473 16335908 1
CDS:C11G6.1d 16340816 16341099 1
CDS:C11G6.1d 16342286 16342479 1
CDS:C11G6.1d 16344055 16344546 1
CDS:C11G6.1d 16345434 16345587 1

1 Sequence

Length
2829

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C11G6.1d.1 C11G6.1d.1 3285   X: 16332435-16346028