WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C11G6.4a.1 Sequence Name  C11G6.4a.1
Length (nt)  1677   Chromosome Location  X: 16354976-16359650
Chromosome . Primary Identifier  X Chromosome Location . Start  16354976
Chromosome Location . End  16359650 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C11G6.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003624 nhr-28 C11G6.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C11G6.4a C11G6.4a 1314   X: 16354989-16355065

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C11G6.4a.1 16354976 16359650 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon263985   90   X: 16354976-16355065 Caenorhabditis elegans
Exon263986   86   X: 16355290-16355375 Caenorhabditis elegans
Exon263989   66   X: 16355621-16355686 Caenorhabditis elegans
Exon263991   95   X: 16356446-16356540 Caenorhabditis elegans
Exon263994   126   X: 16356587-16356712 Caenorhabditis elegans
Exon263997   126   X: 16356766-16356891 Caenorhabditis elegans
Exon264000   185   X: 16357208-16357392 Caenorhabditis elegans
Exon264003   271   X: 16358164-16358434 Caenorhabditis elegans
Exon264006   185   X: 16358485-16358669 Caenorhabditis elegans
Exon264011   447   X: 16359204-16359650 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C11G6.4a.1 16354976 16359650 1

1 Sequence

Length
1677

1 Sequence Ontology Term

Identifier Name Description
transcript