WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C11G6.4b.1 Sequence Name  C11G6.4b.1
Length (nt)  1827   Chromosome Location  X: 16354976-16359555
Chromosome . Primary Identifier  X Chromosome Location . Start  16354976
Chromosome Location . End  16359555 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C11G6.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003624 nhr-28 C11G6.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C11G6.4b C11G6.4b 1140   X: 16355632-16355686

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C11G6.4b.1 16354976 16359555 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon263984   90   X: 16354976-16355065 Caenorhabditis elegans
Exon263987   397   X: 16355290-16355686 Caenorhabditis elegans
Exon263992   95   X: 16356446-16356540 Caenorhabditis elegans
Exon263995   126   X: 16356587-16356712 Caenorhabditis elegans
Exon263998   126   X: 16356766-16356891 Caenorhabditis elegans
Exon264001   185   X: 16357208-16357392 Caenorhabditis elegans
Exon264004   271   X: 16358164-16358434 Caenorhabditis elegans
Exon264007   185   X: 16358485-16358669 Caenorhabditis elegans
Exon264009   352   X: 16359204-16359555 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C11G6.4b.1 16354976 16359555 1

1 Sequence

Length
1827

1 Sequence Ontology Term

Identifier Name Description
transcript