WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C31H5.6a.1 Sequence Name  C31H5.6a.1
Length (nt)  1402   Chromosome Location  I: 9043321-9046575
Chromosome . Primary Identifier  I Chromosome Location . Start  9043321
Chromosome Location . End  9046575 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C31H5.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007857 C31H5.6 C31H5.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C31H5.6a C31H5.6a 1299   I: 9043420-9043680

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C31H5.6a.1 9043321 9046575 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon24052   360   I: 9043321-9043680 Caenorhabditis elegans
Exon24054   87   I: 9043752-9043838 Caenorhabditis elegans
Exon24056   139   I: 9043911-9044049 Caenorhabditis elegans
Exon24058   89   I: 9044097-9044185 Caenorhabditis elegans
Exon24060   111   I: 9044599-9044709 Caenorhabditis elegans
Exon24062   105   I: 9044761-9044865 Caenorhabditis elegans
Exon24064   190   I: 9044925-9045114 Caenorhabditis elegans
Exon24067   106   I: 9045259-9045364 Caenorhabditis elegans
Exon24068   107   I: 9046315-9046421 Caenorhabditis elegans
Exon24069   108   I: 9046468-9046575 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C31H5.6a.1 9043321 9046575 -1

1 Sequence

Length
1402

1 Sequence Ontology Term

Identifier Name Description
transcript