WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00199842 Gene Name  F38E9.9
Sequence Name  ? F38E9.9 Organism  Caenorhabditis elegans
Automated Description  Is affected by daf-2 and eat-2 based on microarray studies. Biotype  SO:0001263
Genetic Position  :± Length (nt)  ? 122
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00199842

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F38E9.9 F38E9.9 122   X: 16440625-16440746
 

Other

0 CDSs

0 RNAi Result

5 Allele

Public Name
gk964260
gk962707
gk963810
gk963581
gk833718

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00199842 16440625 16440746 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrX_16440747..16441143   397 X: 16440747-16441143 Caenorhabditis elegans

2 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly decreased expression in daf-2(e1370) comparing to in N2. Student's t-test, fold change > 2, p-value < 0.05. WBPaper00055386:daf-2(e1370)_downregulated
  Transcripts that showed significantly decreased expression in eat-2(ad465) comparing to in N2. Student's t-test, fold change > 2, p-value < 0.05. WBPaper00055386:eat-2(ad465)_downregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00199842 16440625 16440746 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
122

1 Sequence Ontology Term