WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W10D5.3e.1 Sequence Name  W10D5.3e.1
Length (nt)  2379   Chromosome Location  I: 9100845-9107596
Chromosome . Primary Identifier  I Chromosome Location . Start  9100845
Chromosome Location . End  9107596 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W10D5.3e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001574 gei-17 W10D5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W10D5.3e W10D5.3e 1992   I: 9101175-9101233

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W10D5.3e.1 9100845 9107596 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon24180   389   I: 9100845-9101233 Caenorhabditis elegans
Exon24194   166   I: 9101838-9102003 Caenorhabditis elegans
Exon24209   257   I: 9102641-9102897 Caenorhabditis elegans
Exon24222   266   I: 9103047-9103312 Caenorhabditis elegans
Exon24229   473   I: 9104049-9104521 Caenorhabditis elegans
Exon24239   97   I: 9104606-9104702 Caenorhabditis elegans
Exon24249   95   I: 9104748-9104842 Caenorhabditis elegans
Exon24259   126   I: 9104899-9105024 Caenorhabditis elegans
Exon24269   201   I: 9105860-9106060 Caenorhabditis elegans
Exon24281   30   I: 9107002-9107031 Caenorhabditis elegans
Exon24290   114   I: 9107111-9107224 Caenorhabditis elegans
Exon24300   36   I: 9107307-9107342 Caenorhabditis elegans
Exon24309   129   I: 9107468-9107596 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W10D5.3e.1 9100845 9107596 -1

1 Sequence

Length
2379

1 Sequence Ontology Term

Identifier Name Description
transcript