WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F38E9.2.2 Sequence Name  F38E9.2.2
Length (nt)  3438   Chromosome Location  X: 16456991-16471333
Chromosome . Primary Identifier  X Chromosome Location . Start  16456991
Chromosome Location . End  16471333 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F38E9.2.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003555 nas-39 F38E9.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F38E9.2 F38E9.2 2787   X: 16457459-16457672

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F38E9.2.2 16456991 16471333 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon264207   682   X: 16456991-16457672 Caenorhabditis elegans
Exon264212   121   X: 16458566-16458686 Caenorhabditis elegans
Exon264214   179   X: 16461174-16461352 Caenorhabditis elegans
Exon264218   74   X: 16461664-16461737 Caenorhabditis elegans
Exon264220   73   X: 16461783-16461855 Caenorhabditis elegans
Exon264222   81   X: 16461960-16462040 Caenorhabditis elegans
Exon264224   114   X: 16462088-16462201 Caenorhabditis elegans
Exon264226   96   X: 16463355-16463450 Caenorhabditis elegans
Exon264228   161   X: 16464323-16464483 Caenorhabditis elegans
Exon264230   102   X: 16464538-16464639 Caenorhabditis elegans
Exon264232   155   X: 16464708-16464862 Caenorhabditis elegans
Exon264234   116   X: 16465559-16465674 Caenorhabditis elegans
Exon264236   285   X: 16466332-16466616 Caenorhabditis elegans
Exon264238   162   X: 16466666-16466827 Caenorhabditis elegans
Exon264240   99   X: 16466880-16466978 Caenorhabditis elegans
Exon264242   95   X: 16467975-16468069 Caenorhabditis elegans
Exon264244   94   X: 16468117-16468210 Caenorhabditis elegans
Exon264246   120   X: 16468315-16468434 Caenorhabditis elegans
Exon264248   89   X: 16468516-16468604 Caenorhabditis elegans
Exon264250   108   X: 16470257-16470364 Caenorhabditis elegans
Exon264252   85   X: 16470853-16470937 Caenorhabditis elegans
Exon264254   347   X: 16470987-16471333 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F38E9.2.2 16456991 16471333 1

1 Sequence

Length
3438

1 Sequence Ontology Term

Identifier Name Description
transcript