WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W10D5.3a.2 Sequence Name  W10D5.3a.2
Length (nt)  2393   Chromosome Location  I: 9100849-9107566
Chromosome . Primary Identifier  I Chromosome Location . Start  9100849
Chromosome Location . End  9107566 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W10D5.3a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001574 gei-17 W10D5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W10D5.3a W10D5.3a 2040   I: 9101175-9101233

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W10D5.3a.2 9100849 9107566 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon24182   385   I: 9100849-9101233 Caenorhabditis elegans
Exon24189   166   I: 9101838-9102003 Caenorhabditis elegans
Exon24204   257   I: 9102641-9102897 Caenorhabditis elegans
Exon24214   314   I: 9102999-9103312 Caenorhabditis elegans
Exon24224   473   I: 9104049-9104521 Caenorhabditis elegans
Exon24234   97   I: 9104606-9104702 Caenorhabditis elegans
Exon24244   95   I: 9104748-9104842 Caenorhabditis elegans
Exon24254   126   I: 9104899-9105024 Caenorhabditis elegans
Exon24268   201   I: 9105860-9106060 Caenorhabditis elegans
Exon24276   30   I: 9107002-9107031 Caenorhabditis elegans
Exon24285   114   I: 9107111-9107224 Caenorhabditis elegans
Exon24295   36   I: 9107307-9107342 Caenorhabditis elegans
Exon24305   99   I: 9107468-9107566 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W10D5.3a.2 9100849 9107566 -1

1 Sequence

Length
2393

1 Sequence Ontology Term

Identifier Name Description
transcript