WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W10D5.3a.1 Sequence Name  W10D5.3a.1
Length (nt)  2424   Chromosome Location  I: 9100849-9107597
Chromosome . Primary Identifier  I Chromosome Location . Start  9100849
Chromosome Location . End  9107597 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W10D5.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001574 gei-17 W10D5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W10D5.3a W10D5.3a 2040   I: 9101175-9101233

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W10D5.3a.1 9100849 9107597 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon24183   385   I: 9100849-9101233 Caenorhabditis elegans
Exon24188   166   I: 9101838-9102003 Caenorhabditis elegans
Exon24203   257   I: 9102641-9102897 Caenorhabditis elegans
Exon24213   314   I: 9102999-9103312 Caenorhabditis elegans
Exon24223   473   I: 9104049-9104521 Caenorhabditis elegans
Exon24233   97   I: 9104606-9104702 Caenorhabditis elegans
Exon24243   95   I: 9104748-9104842 Caenorhabditis elegans
Exon24253   126   I: 9104899-9105024 Caenorhabditis elegans
Exon24267   201   I: 9105860-9106060 Caenorhabditis elegans
Exon24275   30   I: 9107002-9107031 Caenorhabditis elegans
Exon24284   114   I: 9107111-9107224 Caenorhabditis elegans
Exon24294   36   I: 9107307-9107342 Caenorhabditis elegans
Exon24310   130   I: 9107468-9107597 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W10D5.3a.1 9100849 9107597 -1

1 Sequence

Length
2424

1 Sequence Ontology Term

Identifier Name Description
transcript