WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W10D5.3d.1 Sequence Name  W10D5.3d.1
Length (nt)  2069   Chromosome Location  I: 9101175-9107574
Chromosome . Primary Identifier  I Chromosome Location . Start  9101175
Chromosome Location . End  9107574 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W10D5.3d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001574 gei-17 W10D5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W10D5.3d W10D5.3d 2034   I: 9101175-9101233

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W10D5.3d.1 9101175 9107574 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon24184   59   I: 9101175-9101233 Caenorhabditis elegans
Exon24193   166   I: 9101838-9102003 Caenorhabditis elegans
Exon24208   257   I: 9102641-9102897 Caenorhabditis elegans
Exon24218   314   I: 9102999-9103312 Caenorhabditis elegans
Exon24228   473   I: 9104049-9104521 Caenorhabditis elegans
Exon24238   97   I: 9104606-9104702 Caenorhabditis elegans
Exon24248   95   I: 9104748-9104842 Caenorhabditis elegans
Exon24258   126   I: 9104899-9105024 Caenorhabditis elegans
Exon24266   195   I: 9105860-9106054 Caenorhabditis elegans
Exon24280   30   I: 9107002-9107031 Caenorhabditis elegans
Exon24289   114   I: 9107111-9107224 Caenorhabditis elegans
Exon24299   36   I: 9107307-9107342 Caenorhabditis elegans
Exon24307   107   I: 9107468-9107574 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W10D5.3d.1 9101175 9107574 -1

1 Sequence

Length
2069

1 Sequence Ontology Term

Identifier Name Description
transcript