WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W10D5.3g.1 Sequence Name  W10D5.3g.1
Length (nt)  2116   Chromosome Location  I: 9101530-9107597
Chromosome . Primary Identifier  I Chromosome Location . Start  9101530
Chromosome Location . End  9107597 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W10D5.3g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001574 gei-17 W10D5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W10D5.3g W10D5.3g 2058   I: 9101530-9101672

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W10D5.3g.1 9101530 9107597 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon24187   143   I: 9101530-9101672 Caenorhabditis elegans
Exon24196   166   I: 9101838-9102003 Caenorhabditis elegans
Exon24198   135   I: 9102265-9102399 Caenorhabditis elegans
Exon24211   257   I: 9102641-9102897 Caenorhabditis elegans
Exon24220   314   I: 9102999-9103312 Caenorhabditis elegans
Exon24231   473   I: 9104049-9104521 Caenorhabditis elegans
Exon24241   97   I: 9104606-9104702 Caenorhabditis elegans
Exon24251   95   I: 9104748-9104842 Caenorhabditis elegans
Exon24261   126   I: 9104899-9105024 Caenorhabditis elegans
Exon24283   30   I: 9107002-9107031 Caenorhabditis elegans
Exon24292   114   I: 9107111-9107224 Caenorhabditis elegans
Exon24302   36   I: 9107307-9107342 Caenorhabditis elegans
Exon24311   130   I: 9107468-9107597 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W10D5.3g.1 9101530 9107597 -1

1 Sequence

Length
2116

1 Sequence Ontology Term

Identifier Name Description
transcript