WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25H5.1f.1 Sequence Name  F25H5.1f.1
Length (nt)  2783   Chromosome Location  I: 9181810-9210337
Chromosome . Primary Identifier  I Chromosome Location . Start  9181810
Chromosome Location . End  9210337 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25H5.1f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006407 lim-9 F25H5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25H5.1f F25H5.1f 1971   I: 9182622-9182648

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F25H5.1f.1 9181810 9210337 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon24497   839   I: 9181810-9182648 Caenorhabditis elegans
Exon24509   143   I: 9182704-9182846 Caenorhabditis elegans
Exon24518   357   I: 9183147-9183503 Caenorhabditis elegans
Exon24525   72   I: 9183832-9183903 Caenorhabditis elegans
Exon24532   103   I: 9184251-9184353 Caenorhabditis elegans
Exon24539   201   I: 9184866-9185066 Caenorhabditis elegans
Exon24545   99   I: 9191557-9191655 Caenorhabditis elegans
Exon24551   117   I: 9192038-9192154 Caenorhabditis elegans
Exon24557   237   I: 9192368-9192604 Caenorhabditis elegans
Exon24563   95   I: 9194413-9194507 Caenorhabditis elegans
Exon24568   98   I: 9195027-9195124 Caenorhabditis elegans
Exon24574   146   I: 9205587-9205732 Caenorhabditis elegans
Exon24577   60   I: 9209390-9209449 Caenorhabditis elegans
Exon24580   105   I: 9209853-9209957 Caenorhabditis elegans
Exon24583   111   I: 9210227-9210337 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F25H5.1f.1 9181810 9210337 -1

1 Sequence

Length
2783

1 Sequence Ontology Term

Identifier Name Description
transcript