WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25H5.1b.1 Sequence Name  F25H5.1b.1
Length (nt)  2855   Chromosome Location  I: 9181819-9199311
Chromosome . Primary Identifier  I Chromosome Location . Start  9181819
Chromosome Location . End  9199311 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25H5.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006407 lim-9 F25H5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25H5.1b F25H5.1b 1860   I: 9182622-9182648

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F25H5.1b.1 9181819 9199311 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon24501   830   I: 9181819-9182648 Caenorhabditis elegans
Exon24505   143   I: 9182704-9182846 Caenorhabditis elegans
Exon24514   357   I: 9183147-9183503 Caenorhabditis elegans
Exon24521   72   I: 9183832-9183903 Caenorhabditis elegans
Exon24528   103   I: 9184251-9184353 Caenorhabditis elegans
Exon24536   201   I: 9184866-9185066 Caenorhabditis elegans
Exon24542   99   I: 9191557-9191655 Caenorhabditis elegans
Exon24548   117   I: 9192038-9192154 Caenorhabditis elegans
Exon24554   237   I: 9192368-9192604 Caenorhabditis elegans
Exon24561   95   I: 9194413-9194507 Caenorhabditis elegans
Exon24566   98   I: 9195027-9195124 Caenorhabditis elegans
Exon24571   503   I: 9198809-9199311 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F25H5.1b.1 9181819 9199311 -1

1 Sequence

Length
2855

1 Sequence Ontology Term

Identifier Name Description
transcript