WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25H5.1h.1 Sequence Name  F25H5.1h.1
Length (nt)  3095   Chromosome Location  I: 9181819-9219029
Chromosome . Primary Identifier  I Chromosome Location . Start  9181819
Chromosome Location . End  9219029 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25H5.1h.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006407 lim-9 F25H5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25H5.1h F25H5.1h 2292   I: 9182622-9182648

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F25H5.1h.1 9181819 9219029 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon24502   830   I: 9181819-9182648 Caenorhabditis elegans
Exon24511   143   I: 9182704-9182846 Caenorhabditis elegans
Exon24519   357   I: 9183147-9183503 Caenorhabditis elegans
Exon24526   72   I: 9183832-9183903 Caenorhabditis elegans
Exon24533   103   I: 9184251-9184353 Caenorhabditis elegans
Exon24540   201   I: 9184866-9185066 Caenorhabditis elegans
Exon24546   99   I: 9191557-9191655 Caenorhabditis elegans
Exon24552   117   I: 9192038-9192154 Caenorhabditis elegans
Exon24558   237   I: 9192368-9192604 Caenorhabditis elegans
Exon24564   95   I: 9194413-9194507 Caenorhabditis elegans
Exon24569   98   I: 9195027-9195124 Caenorhabditis elegans
Exon24575   146   I: 9205587-9205732 Caenorhabditis elegans
Exon24578   60   I: 9209390-9209449 Caenorhabditis elegans
Exon24581   105   I: 9209853-9209957 Caenorhabditis elegans
Exon24584   111   I: 9210227-9210337 Caenorhabditis elegans
Exon24586   216   I: 9218496-9218711 Caenorhabditis elegans
Exon24588   105   I: 9218925-9219029 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F25H5.1h.1 9181819 9219029 -1

1 Sequence

Length
3095

1 Sequence Ontology Term

Identifier Name Description
transcript