WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F25H5.1e Sequence Name  F25H5.1e
Length (nt)  1461   Chromosome Location  I: 9182622-9182648
Chromosome . Primary Identifier  I Chromosome Location . Start  9182622
Chromosome Location . End  9182648
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25H5.1e

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE50519 LIM-9, isoform e 55.6 486 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00045546
WBRNAi00003463
WBRNAi00107936
WBRNAi00092867
WBRNAi00081080

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:F25H5.1e 9182622 9182648 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006407 lim-9 F25H5.1 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier 		Start End Strand
CDS:F25H5.1e 9182622 9182648 -1
CDS:F25H5.1e 9182704 9182846 -1
CDS:F25H5.1e 9183147 9183503 -1
CDS:F25H5.1e 9183832 9183903 -1
CDS:F25H5.1e 9184251 9184353 -1
CDS:F25H5.1e 9184866 9185066 -1
CDS:F25H5.1e 9191557 9191655 -1
CDS:F25H5.1e 9192038 9192154 -1
CDS:F25H5.1e 9192368 9192604 -1
CDS:F25H5.1e 9192723 9192827 -1

1 Sequence

Length
1461

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F25H5.1e.1 F25H5.1e.1 2322   I: 9181819-9192885