WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F43B10.1b.1 Sequence Name  F43B10.1b.1
Length (nt)  2370   Chromosome Location  X: 16638226-16643558
Chromosome . Primary Identifier  X Chromosome Location . Start  16638226
Chromosome Location . End  16643558 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F43B10.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018373 F43B10.1 F43B10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F43B10.1b F43B10.1b 1818   X: 16638722-16638782

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F43B10.1b.1 16638226 16643558 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon264510   557   X: 16638226-16638782 Caenorhabditis elegans
Exon264512   60   X: 16639143-16639202 Caenorhabditis elegans
Exon264516   339   X: 16639253-16639591 Caenorhabditis elegans
Exon264520   142   X: 16639642-16639783 Caenorhabditis elegans
Exon264524   101   X: 16639835-16639935 Caenorhabditis elegans
Exon264528   288   X: 16640405-16640692 Caenorhabditis elegans
Exon264532   170   X: 16640741-16640910 Caenorhabditis elegans
Exon264536   97   X: 16640958-16641054 Caenorhabditis elegans
Exon264540   303   X: 16641416-16641718 Caenorhabditis elegans
Exon264544   53   X: 16642243-16642295 Caenorhabditis elegans
Exon264548   260   X: 16643299-16643558 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F43B10.1b.1 16638226 16643558 -1

1 Sequence

Length
2370

1 Sequence Ontology Term

Identifier Name Description
transcript