WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F43B10.2b.1 Sequence Name  F43B10.2b.1
Length (nt)  2325   Chromosome Location  X: 16665436-16672603
Chromosome . Primary Identifier  X Chromosome Location . Start  16665436
Chromosome Location . End  16672603 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F43B10.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018374 tag-343 F43B10.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F43B10.2b F43B10.2b 2325   X: 16665436-16665595

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F43B10.2b.1 16665436 16672603 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon264562   160   X: 16665436-16665595 Caenorhabditis elegans
Exon264564   136   X: 16665797-16665932 Caenorhabditis elegans
Exon264566   45   X: 16665978-16666022 Caenorhabditis elegans
Exon264568   214   X: 16666219-16666432 Caenorhabditis elegans
Exon264570   107   X: 16666650-16666756 Caenorhabditis elegans
Exon264572   181   X: 16666809-16666989 Caenorhabditis elegans
Exon264574   176   X: 16667034-16667209 Caenorhabditis elegans
Exon264576   59   X: 16667264-16667322 Caenorhabditis elegans
Exon264578   189   X: 16667370-16667558 Caenorhabditis elegans
Exon264580   111   X: 16667809-16667919 Caenorhabditis elegans
Exon264582   231   X: 16667966-16668196 Caenorhabditis elegans
Exon264584   64   X: 16668356-16668419 Caenorhabditis elegans
Exon264586   113   X: 16670372-16670484 Caenorhabditis elegans
Exon264588   387   X: 16671221-16671607 Caenorhabditis elegans
Exon264590   110   X: 16671687-16671796 Caenorhabditis elegans
Exon264591   42   X: 16672562-16672603 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F43B10.2b.1 16665436 16672603 -1

1 Sequence

Length
2325

1 Sequence Ontology Term

Identifier Name Description
transcript