WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F36H2.1d Sequence Name  F36H2.1d
Length (nt)  3180   Chromosome Location  I: 9234678-9234866
Chromosome . Primary Identifier  I Chromosome Location . Start  9234678
Chromosome Location . End  9234866
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F36H2.1d

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE54235 TAT-5, isoform d 119.1 1059 Caenorhabditis elegans
 

Other

29 RNAi

WormBase ID
WBRNAi00078014
WBRNAi00046535
WBRNAi00025410
WBRNAi00085795
WBRNAi00002386
WBRNAi00091438
WBRNAi00081316
WBRNAi00000048
WBRNAi00108151
WBRNAi00091437
WBRNAi00108150
WBRNAi00116681
WBRNAi00077716
WBRNAi00108143
WBRNAi00025411
WBRNAi00099089
WBRNAi00091351
WBRNAi00108144
WBRNAi00097535
WBRNAi00091436
WBRNAi00091441
WBRNAi00108147
WBRNAi00108145
WBRNAi00108148
WBRNAi00108149
WBRNAi00099113
WBRNAi00099086
WBRNAi00108152
WBRNAi00108146

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F36H2.1d 9234678 9234866 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009498 tat-5 F36H2.1 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:F36H2.1d 9234678 9234866 -1
CDS:F36H2.1d 9235674 9235822 -1
CDS:F36H2.1d 9235869 9236125 -1
CDS:F36H2.1d 9236911 9237485 -1
CDS:F36H2.1d 9237965 9238562 -1
CDS:F36H2.1d 9238910 9239246 -1
CDS:F36H2.1d 9239689 9239935 -1
CDS:F36H2.1d 9239990 9240499 -1
CDS:F36H2.1d 9240900 9241059 -1
CDS:F36H2.1d 9245688 9245767 -1
CDS:F36H2.1d 9245814 9245891 -1

1 Sequence

Length
3180

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F36H2.1d.1 F36H2.1d.1 3715   I: 9234178-9245926