WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C10E2.3a.1 Sequence Name  C10E2.3a.1
Length (nt)  3622   Chromosome Location  X: 16729559-16744767
Chromosome . Primary Identifier  X Chromosome Location . Start  16729559
Chromosome Location . End  16744767 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C10E2.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001837 hda-4 C10E2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C10E2.3a C10E2.3a 2610   X: 16729563-16729703

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C10E2.3a.1 16729559 16744767 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon264651   145   X: 16729559-16729703 Caenorhabditis elegans
Exon264653   199   X: 16739817-16740015 Caenorhabditis elegans
Exon264655   124   X: 16740577-16740700 Caenorhabditis elegans
Exon264657   405   X: 16740789-16741193 Caenorhabditis elegans
Exon264659   146   X: 16741240-16741385 Caenorhabditis elegans
Exon264661   108   X: 16741438-16741545 Caenorhabditis elegans
Exon264663   644   X: 16741726-16742369 Caenorhabditis elegans
Exon264665   171   X: 16742413-16742583 Caenorhabditis elegans
Exon264667   444   X: 16742628-16743071 Caenorhabditis elegans
Exon264669   93   X: 16743487-16743579 Caenorhabditis elegans
Exon264672   1143   X: 16743625-16744767 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C10E2.3a.1 16729559 16744767 1

1 Sequence

Length
3622

1 Sequence Ontology Term

Identifier Name Description
transcript