WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C10E2.3b.1 Sequence Name  C10E2.3b.1
Length (nt)  2451   Chromosome Location  X: 16739835-16743759
Chromosome . Primary Identifier  X Chromosome Location . Start  16739835
Chromosome Location . End  16743759 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C10E2.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001837 hda-4 C10E2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C10E2.3b C10E2.3b 2451   X: 16739835-16740015

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C10E2.3b.1 16739835 16743759 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon264654   181   X: 16739835-16740015 Caenorhabditis elegans
Exon264656   124   X: 16740577-16740700 Caenorhabditis elegans
Exon264658   405   X: 16740789-16741193 Caenorhabditis elegans
Exon264660   146   X: 16741240-16741385 Caenorhabditis elegans
Exon264662   108   X: 16741438-16741545 Caenorhabditis elegans
Exon264664   644   X: 16741726-16742369 Caenorhabditis elegans
Exon264666   171   X: 16742413-16742583 Caenorhabditis elegans
Exon264668   444   X: 16742628-16743071 Caenorhabditis elegans
Exon264670   93   X: 16743487-16743579 Caenorhabditis elegans
Exon264671   135   X: 16743625-16743759 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C10E2.3b.1 16739835 16743759 1

1 Sequence

Length
2451

1 Sequence Ontology Term

Identifier Name Description
transcript