WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C10E2.2.2 Sequence Name  C10E2.2.2
Length (nt)  3033   Chromosome Location  X: 16745240-16749536
Chromosome . Primary Identifier  X Chromosome Location . Start  16745240
Chromosome Location . End  16749536 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C10E2.2.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015673 C10E2.2 C10E2.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C10E2.2 C10E2.2 1506   X: 16745753-16745899

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C10E2.2.2 16745240 16749536 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon264673   114   X: 16745240-16745353 Caenorhabditis elegans
Exon264674   147   X: 16745753-16745899 Caenorhabditis elegans
Exon264677   110   X: 16745950-16746059 Caenorhabditis elegans
Exon264679   226   X: 16746106-16746331 Caenorhabditis elegans
Exon264681   240   X: 16746554-16746793 Caenorhabditis elegans
Exon264683   92   X: 16746842-16746933 Caenorhabditis elegans
Exon264685   162   X: 16746987-16747148 Caenorhabditis elegans
Exon264687   171   X: 16747508-16747678 Caenorhabditis elegans
Exon264689   100   X: 16747722-16747821 Caenorhabditis elegans
Exon264691   1671   X: 16747866-16749536 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C10E2.2.2 16745240 16749536 1

1 Sequence

Length
3033

1 Sequence Ontology Term

Identifier Name Description
transcript