WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C10E2.2.1 Sequence Name  C10E2.2.1
Length (nt)  1591   Chromosome Location  X: 16745753-16748208
Chromosome . Primary Identifier  X Chromosome Location . Start  16745753
Chromosome Location . End  16748208 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C10E2.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015673 C10E2.2 C10E2.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C10E2.2 C10E2.2 1506   X: 16745753-16745899

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C10E2.2.1 16745753 16748208 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon264675   147   X: 16745753-16745899 Caenorhabditis elegans
Exon264676   110   X: 16745950-16746059 Caenorhabditis elegans
Exon264678   226   X: 16746106-16746331 Caenorhabditis elegans
Exon264680   240   X: 16746554-16746793 Caenorhabditis elegans
Exon264682   92   X: 16746842-16746933 Caenorhabditis elegans
Exon264684   162   X: 16746987-16747148 Caenorhabditis elegans
Exon264686   171   X: 16747508-16747678 Caenorhabditis elegans
Exon264688   100   X: 16747722-16747821 Caenorhabditis elegans
Exon264690   343   X: 16747866-16748208 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C10E2.2.1 16745753 16748208 1

1 Sequence

Length
1591

1 Sequence Ontology Term

Identifier Name Description
transcript