WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C10E2.5.2 Sequence Name  C10E2.5.2
Length (nt)  1230   Chromosome Location  X: 16749495-16753673
Chromosome . Primary Identifier  X Chromosome Location . Start  16749495
Chromosome Location . End  16753673 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C10E2.5.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015675 C10E2.5 C10E2.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C10E2.5 C10E2.5 777   X: 16749755-16749794

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C10E2.5.2 16749495 16753673 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon264693   300   X: 16749495-16749794 Caenorhabditis elegans
Exon264695   78   X: 16749851-16749928 Caenorhabditis elegans
Exon264697   207   X: 16750643-16750849 Caenorhabditis elegans
Exon264699   161   X: 16750965-16751125 Caenorhabditis elegans
Exon264701   111   X: 16751873-16751983 Caenorhabditis elegans
Exon264703   113   X: 16752587-16752699 Caenorhabditis elegans
Exon264705   260   X: 16753414-16753673 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C10E2.5.2 16749495 16753673 -1

1 Sequence

Length
1230

1 Sequence Ontology Term

Identifier Name Description
transcript