WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F36H2.3j.1 Sequence Name  F36H2.3j.1
Length (nt)  4170   Chromosome Location  I: 9254645-9261640
Chromosome . Primary Identifier  I Chromosome Location . Start  9254645
Chromosome Location . End  9261640 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F36H2.3j.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009500 cfh-1 F36H2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F36H2.3j F36H2.3j 4170   I: 9254645-9254850

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F36H2.3j.1 9254645 9261640 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon24716   206   I: 9254645-9254850 Caenorhabditis elegans
Exon24726   123   I: 9255037-9255159 Caenorhabditis elegans
Exon24737   495   I: 9255272-9255766 Caenorhabditis elegans
Exon24748   276   I: 9255853-9256128 Caenorhabditis elegans
Exon24759   274   I: 9256178-9256451 Caenorhabditis elegans
Exon24767   210   I: 9256520-9256729 Caenorhabditis elegans
Exon24776   213   I: 9256922-9257134 Caenorhabditis elegans
Exon24783   210   I: 9257425-9257634 Caenorhabditis elegans
Exon24791   213   I: 9257891-9258103 Caenorhabditis elegans
Exon24799   210   I: 9258239-9258448 Caenorhabditis elegans
Exon24810   215   I: 9258782-9258996 Caenorhabditis elegans
Exon24821   93   I: 9259048-9259140 Caenorhabditis elegans
Exon24832   187   I: 9259200-9259386 Caenorhabditis elegans
Exon24842   24   I: 9259778-9259801 Caenorhabditis elegans
Exon24853   147   I: 9259891-9260037 Caenorhabditis elegans
Exon24864   305   I: 9260083-9260387 Caenorhabditis elegans
Exon24875   321   I: 9260777-9261097 Caenorhabditis elegans
Exon24886   351   I: 9261148-9261498 Caenorhabditis elegans
Exon24895   97   I: 9261544-9261640 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F36H2.3j.1 9254645 9261640 -1

1 Sequence

Length
4170

1 Sequence Ontology Term

Identifier Name Description
transcript