WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T01C8.1a.1 Sequence Name  T01C8.1a.1
Length (nt)  2371   Chromosome Location  X: 16796087-16803344
Chromosome . Primary Identifier  X Chromosome Location . Start  16796087
Chromosome Location . End  16803344 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01C8.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020142 aak-2 T01C8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T01C8.1a T01C8.1a 1875   X: 16796089-16796231

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T01C8.1a.1 16796087 16803344 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon264747   145   X: 16796087-16796231 Caenorhabditis elegans
Exon264750   164   X: 16799707-16799870 Caenorhabditis elegans
Exon264753   469   X: 16800046-16800514 Caenorhabditis elegans
Exon264756   119   X: 16800689-16800807 Caenorhabditis elegans
Exon264759   106   X: 16801033-16801138 Caenorhabditis elegans
Exon264762   106   X: 16801228-16801333 Caenorhabditis elegans
Exon264766   202   X: 16801389-16801590 Caenorhabditis elegans
Exon264768   312   X: 16801692-16802003 Caenorhabditis elegans
Exon264771   152   X: 16802414-16802565 Caenorhabditis elegans
Exon264775   596   X: 16802749-16803344 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T01C8.1a.1 16796087 16803344 1

1 Sequence

Length
2371

1 Sequence Ontology Term

Identifier Name Description
transcript