WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T01C8.1c Sequence Name  T01C8.1c
Length (nt)  1689   Chromosome Location  X: 16799750-16799870
Chromosome . Primary Identifier  X Chromosome Location . Start  16799750
Chromosome Location . End  16799870
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01C8.1c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE07458 AAK-2, isoform c 63.1 562 Caenorhabditis elegans
 

Other

34 RNAi

WormBase ID
WBRNAi00082231
WBRNAi00082233
WBRNAi00084941
WBRNAi00084935
WBRNAi00070305
WBRNAi00102846
WBRNAi00102847
WBRNAi00052109
WBRNAi00017958
WBRNAi00076627
WBRNAi00114384
WBRNAi00035012
WBRNAi00108294
WBRNAi00082232
WBRNAi00082234
WBRNAi00093039
WBRNAi00114380
WBRNAi00078068
WBRNAi00084952
WBRNAi00092790
WBRNAi00109104
WBRNAi00102798
WBRNAi00102842
WBRNAi00098419
WBRNAi00102894
WBRNAi00084947
WBRNAi00084946
WBRNAi00078067
WBRNAi00070302
WBRNAi00070304

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T01C8.1c 16799750 16799870 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020142 aak-2 T01C8.1 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:T01C8.1c 16799750 16799870 1
CDS:T01C8.1c 16800046 16800514 1
CDS:T01C8.1c 16800689 16800807 1
CDS:T01C8.1c 16801033 16801138 1
CDS:T01C8.1c 16801228 16801333 1
CDS:T01C8.1c 16801389 16801590 1
CDS:T01C8.1c 16801692 16802003 1
CDS:T01C8.1c 16802414 16802565 1
CDS:T01C8.1c 16802749 16802850 1

1 Sequence

Length
1689

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T01C8.1c.1 T01C8.1c.1 2214   X: 16799707-16803332