WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F41G4.2b.1 Sequence Name  F41G4.2b.1
Length (nt)  1709   Chromosome Location  X: 16807459-16813656
Chromosome . Primary Identifier  X Chromosome Location . Start  16807459
Chromosome Location . End  16813656 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F41G4.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000294 cas-1 F41G4.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F41G4.2b F41G4.2b 1488   X: 16807677-16807757

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F41G4.2b.1 16807459 16813656 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon264793   299   X: 16807459-16807757 Caenorhabditis elegans
Exon264795   147   X: 16807803-16807949 Caenorhabditis elegans
Exon264797   207   X: 16808161-16808367 Caenorhabditis elegans
Exon264799   579   X: 16808432-16809010 Caenorhabditis elegans
Exon264801   222   X: 16809105-16809326 Caenorhabditis elegans
Exon264803   134   X: 16809465-16809598 Caenorhabditis elegans
Exon264805   121   X: 16813536-16813656 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F41G4.2b.1 16807459 16813656 -1

1 Sequence

Length
1709

1 Sequence Ontology Term

Identifier Name Description
transcript