WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F41G4.3a.1 Sequence Name  F41G4.3a.1
Length (nt)  1823   Chromosome Location  X: 16816260-16825458
Chromosome . Primary Identifier  X Chromosome Location . Start  16816260
Chromosome Location . End  16825458 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F41G4.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006067 sto-5 F41G4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F41G4.3a F41G4.3a 990   X: 16816421-16816496

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F41G4.3a.1 16816260 16825458 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon264808   237   X: 16816260-16816496 Caenorhabditis elegans
Exon264815   93   X: 16816905-16816997 Caenorhabditis elegans
Exon264822   179   X: 16817048-16817226 Caenorhabditis elegans
Exon264829   343   X: 16817450-16817792 Caenorhabditis elegans
Exon264836   101   X: 16817848-16817948 Caenorhabditis elegans
Exon264843   81   X: 16818291-16818371 Caenorhabditis elegans
Exon264855   58   X: 16824035-16824092 Caenorhabditis elegans
Exon264857   731   X: 16824728-16825458 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F41G4.3a.1 16816260 16825458 -1

1 Sequence

Length
1823

1 Sequence Ontology Term

Identifier Name Description
transcript