WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F41G4.3c.1 Sequence Name  F41G4.3c.1
Length (nt)  1309   Chromosome Location  X: 16816261-16819270
Chromosome . Primary Identifier  X Chromosome Location . Start  16816261
Chromosome Location . End  16819270 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F41G4.3c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006067 sto-5 F41G4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F41G4.3c F41G4.3c 1146   X: 16816421-16816496

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F41G4.3c.1 16816261 16819270 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon264809   236   X: 16816261-16816496 Caenorhabditis elegans
Exon264817   93   X: 16816905-16816997 Caenorhabditis elegans
Exon264824   179   X: 16817048-16817226 Caenorhabditis elegans
Exon264831   343   X: 16817450-16817792 Caenorhabditis elegans
Exon264838   101   X: 16817848-16817948 Caenorhabditis elegans
Exon264845   81   X: 16818291-16818371 Caenorhabditis elegans
Exon264853   276   X: 16818995-16819270 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F41G4.3c.1 16816261 16819270 -1

1 Sequence

Length
1309

1 Sequence Ontology Term

Identifier Name Description
transcript