WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T20F7.1.1 Sequence Name  T20F7.1.1
Length (nt)  2540   Chromosome Location  X: 16872912-16878351
Chromosome . Primary Identifier  X Chromosome Location . Start  16872912
Chromosome Location . End  16878351 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T20F7.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020630 T20F7.1 T20F7.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T20F7.1 T20F7.1 2217   X: 16872926-16873144

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T20F7.1.1 16872912 16878351 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon264903   233   X: 16872912-16873144 Caenorhabditis elegans
Exon264904   127   X: 16873639-16873765 Caenorhabditis elegans
Exon264905   245   X: 16873816-16874060 Caenorhabditis elegans
Exon264906   323   X: 16874112-16874434 Caenorhabditis elegans
Exon264907   148   X: 16874491-16874638 Caenorhabditis elegans
Exon264908   83   X: 16875139-16875221 Caenorhabditis elegans
Exon264909   138   X: 16875266-16875403 Caenorhabditis elegans
Exon264910   247   X: 16875448-16875694 Caenorhabditis elegans
Exon264911   156   X: 16876953-16877108 Caenorhabditis elegans
Exon264912   363   X: 16877155-16877517 Caenorhabditis elegans
Exon264913   477   X: 16877875-16878351 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T20F7.1.1 16872912 16878351 1

1 Sequence

Length
2540

1 Sequence Ontology Term

Identifier Name Description
transcript