WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F35B3.5d Sequence Name  F35B3.5d
Length (nt)  1161   Chromosome Location  X: 17022269-17022410
Chromosome . Primary Identifier  X Chromosome Location . Start  17022269
Chromosome Location . End  17022410
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F35B3.5d

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE48517 PTRN-1, isoform d 43.8 386 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00046282
WBRNAi00014292
WBRNAi00031747

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F35B3.5d 17022269 17022410 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004121 ptrn-1 F35B3.5 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:F35B3.5d 17022269 17022410 -1
CDS:F35B3.5d 17022460 17022536 -1
CDS:F35B3.5d 17022584 17022679 -1
CDS:F35B3.5d 17022985 17023094 -1
CDS:F35B3.5d 17023447 17023843 -1
CDS:F35B3.5d 17023891 17024021 -1
CDS:F35B3.5d 17024072 17024150 -1
CDS:F35B3.5d 17024258 17024386 -1

1 Sequence

Length
1161

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F35B3.5d.1 F35B3.5d.1 1161   X: 17022269-17024386